Insertion junction: CLIP2.040167_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040167
Chromosome:chromosome 12
Location:5430192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529550 CALK1,CALK,ALK1 Aurora-like kinase; (1 of 1) PF00069//PF07714//PF14531 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // Kinase-like (Kinase-like) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCATGGGTGTTGCTCGCCTGCCGGGCCAACACAGCACGCCGGCAAAG
Internal bar code:GCCGTCATACCCGTTCCGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2104
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAAAGACCCTGAAGCCAT
Suggested primer 2:ACTTACTTGCACCTGACCCG