Insertion junction: CLIP2.040169_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040169
Chromosome:chromosome 2
Location:6646293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389900 HRP4 Hydroxyproline-rich glycoprotein; (1 of 1) PTHR15744//PTHR15744:SF0 - BLOM7 // UPF0469 PROTEIN KIAA0907 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGGGCCCTCAGGCGCCGCAGCTGGCATGTTTGCAGGCACGTCCCATT
Internal bar code:GATTCGATTAGCGGTCTCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3207
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGAGGGTTGTTCTTCCC
Suggested primer 2:TGCTTCTCTGCATCCGTCTG