Insertion junction: CLIP2.040171_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040171
Chromosome:chromosome 17
Location:3389511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723200 FAP372 Flagellar Associated EF Hand Protein 372 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGGACGGCCGCATGCGCGATTACGCAGCAAACCTGGCCAAGGTGCGT
Internal bar code:CCTTGGGCTATTGCCGGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:73.8095
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AACACGGCAAGGCATTTGAC
Suggested primer 2:TCTTTCATGACCTGCGACCC