Insertion junction: CLIP2.040174_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040174
Chromosome:chromosome 16
Location:5364906
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683400 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCAGTCGTTTGTGGACCCCAAGACCTACAAGAAGATCCGCTTCCTGC
Internal bar code:GACCATGACCTCAAAACAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3297
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGTACGGCTTGAGAGGC
Suggested primer 2:GATCTGGGTGTGCGACTTCA