Insertion junction: CLIP2.040175_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040175
Chromosome:chromosome 2
Location:3334097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097900 AST3 (1 of 1) K00811 - aspartate aminotransferase, chloroplastic (ASP5); Aspartate aminotransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCTGTCGGGCACGGGCAGCCTGCGTGTGGGCGCGGCCTTCATTGCGC
Internal bar code:CTCATATACGCTCCTGTTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:267
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCGTTACGAGAACCAAG
Suggested primer 2:CCTCCTCCCTAACCCGTACA