Insertion junction: CLIP2.040175_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040175
Chromosome:chromosome 2
Location:3334098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097900 AST3 (1 of 1) K00811 - aspartate aminotransferase, chloroplastic (ASP5); Aspartate aminotransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACCACAGCCACACGGCCCTGCGGGGTGCGGGGGCATGTGCGGGGAG
Internal bar code:CCGTATGTTAGCGCGGAATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:290
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTCCCTAACCCGTACA
Suggested primer 2:AGGGCGTTACGAGAACCAAG