Insertion junction: CLIP2.040180_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040180
Chromosome:chromosome 1
Location:5654239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGACTAGAACGTGTACCTTGCCACCATCGGCGCTTCCCATTCCAGTC
Internal bar code:CGTAGGTACCTATGTGCGCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:771
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCATAGGCATTAGGCGAGCG
Suggested primer 2:GACTCAACTCTCCGCCACAA