Insertion junction: CLIP2.040181_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040181
Chromosome:chromosome 16
Location:6450415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00152270

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTCCGAGTCTGGTCTTGGAGCTTCCCATACAACCTGTGTGCGCGTAC
Internal bar code:CCGACATATTTACGCATTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5150
LEAP-Seq percent confirming:94.9367
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGCATTTGTTGAGCACT
Suggested primer 2:TCGCTGAGGTCAACATGCAT