Insertion junction: CLIP2.040181_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040181
Chromosome:chromosome 16
Location:6450415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00152270

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAACCTTTTGTGCGTTCAGCGCCGACGCACCAGACCATGTCATGTAGAG
Internal bar code:GCAGCGGCGCTCCCCGGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2620
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGAGGTCAACATGCAT
Suggested primer 2:CGCAGCATTTGTTGAGCACT