Insertion junction: CLIP2.040184_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040184
Chromosome:chromosome 6
Location:5348123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285001 (1 of 1) PTHR34180//PTHR34180:SF1 - FAMILY NOT NAMED // MUTANT TAN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCTGGCAGTACATGTCTCCCAAGCCTACGCGTGGCGTTAGACGTCAG
Internal bar code:TTGATGTATCACGGCCTATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:925
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGGAATGCAGGGCTAG
Suggested primer 2:CAGTGTATGTGTGCGTGTGC