Insertion junction: CLIP2.040188_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040188
Chromosome:chromosome 16
Location:2715560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661900 HEL61 (1 of 3) PTHR24031//PTHR24031:SF232 - RNA HELICASE // ATP-DEPENDENT RNA HELICASE TDRD12-RELATED; DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAACATCCATCCTAACAGCAAGAGGTGAGGAGCCCGCTGCGAGGCAC
Internal bar code:AAGTAGTAAGCACTGTGCTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2625
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGGATTGAGGCATTGCA
Suggested primer 2:CTGTGCACCGCGATACATTG