Insertion junction: CLIP2.040206_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040206
Chromosome:chromosome 16
Location:1325146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651700 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAATGGTGACGGCGGCAAGAATGCCACTGTATCGGATCTGCTGCAGCC
Internal bar code:GGTCCACTATGAGGGTATTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4367
LEAP-Seq percent confirming:79.5455
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCTTGGTGCACTTGTGG
Suggested primer 2:GCCGTATATCGTGAGTGGCA