Insertion junction: CLIP2.040208_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040208
Chromosome:chromosome 6
Location:3945831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278198 (1 of 1) 1.14.11.33//4.2.99.18 - DNA oxidative demethylase / Alkylated DNA repair protein // DNA-(apurinic or apyrimidinic site) lyase / Phage-T4 UV endonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCATGATGCACGCACATGCGCCTGGCCTTGTGGCTACCGCGTCCCAGC
Internal bar code:CAGGCATAATTGCCACTTGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCATCGCCATTTCAAGC
Suggested primer 2:CAAGCTCATGTGTATGCGCG