Insertion junction: CLIP2.040212_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040212
Chromosome:chromosome 2
Location:4953003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110300 DNJ25 (1 of 62) PF00226 - DnaJ domain (DnaJ); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTGCCATGGCTGTCGACCGGGCACTTCGGTGTGGACCACAGGGCGAC
Internal bar code:TTTAGGTTGTGTACAGCATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2473
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAACAATCACAACGCCT
Suggested primer 2:ATAGTATGGCCGTCAGCACG