Insertion junction: CLIP2.040213_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040213
Chromosome:chromosome 13
Location:2578885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580600 ATT1,ATE1 Arginyl-tRNA protein transferase; (1 of 1) 2.3.2.8 - Arginyltransferase / Arginyl-tRNA--protein transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCGGGAAAGGGCGTGACGAAGACTGCGGAGGTGGGACTGGGCCCGGG
Internal bar code:TTGTGCTACTGGAGAGAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1807
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGTTTCGTCCCCGAGA
Suggested primer 2:GTATGGCAAGAGGAGGGACG