Insertion junction: CLIP2.040213_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040213
Chromosome:chromosome 13
Location:2578908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580600 ATT1,ATE1 Arginyl-tRNA protein transferase; (1 of 1) 2.3.2.8 - Arginyltransferase / Arginyl-tRNA--protein transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAACTGACCGGGTCCCTTGGCCCGCCCCTCTGCGCCCGCCCTCCGCG
Internal bar code:TTGTGCTACTGGAGAGAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGGCAAGAGGAGGGACG
Suggested primer 2:CAACAGTTTCGTCCCCGAGA