Insertion junction: CLIP2.040216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040216
Chromosome:chromosome 3
Location:409727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144847 PYK4 (1 of 2) PTHR11817//PTHR11817:SF3 - PYRUVATE KINASE // PYRUVATE KINASE; Pyruvate kinase 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGCGGGTGCGTGCGGCCGCCGCCGACAGGACTTCTACCAGAAGCTGG
Internal bar code:TATTTTACGTACATTCATCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2348
LEAP-Seq percent confirming:71.7391
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGAGGTGAAGGAAGAC
Suggested primer 2:TATGCCAAGCGGTGTTGAGT