Insertion junction: CLIP2.040216_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040216
Chromosome:chromosome 3
Location:409732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144847 PYK4 (1 of 2) PTHR11817//PTHR11817:SF3 - PYRUVATE KINASE // PYRUVATE KINASE; Pyruvate kinase 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATACAGCCGAACTTGAGCACGCACTTCCACAGGACTGCATTTAAAGC
Internal bar code:GTCATCGCAGGGAATAGTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2580
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCCAAGCGGTGTTGAGT
Suggested primer 2:GGGCAGAGGTGAAGGAAGAC