Insertion junction: CLIP2.040219_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040219
Chromosome:chromosome 2
Location:5180355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112000 AOT7 Amino acid transporter; (1 of 1) K14997 - solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11 (SLC38A11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGACTGCGTGCCGGTGCGGCGTACGGCACGAGCACCGTTGCGTGCAAGC
Internal bar code:AATTATACTTTCGAGCGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2178
LEAP-Seq percent confirming:98.3051
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTACATGGGAGCATGCGC
Suggested primer 2:ACCAAAGACCAACCAAGGCA