Insertion junction: CLIP2.040221_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040221
Chromosome:chromosome 10
Location:6441587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464800 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAAGCTCAGAAGACCCCCACCTGCTCTCCCCGCTTCCCCCCGCCTCC
Internal bar code:GCACGATAAGAAAAAGGCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1714
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCCTTCAGACACGTGGA
Suggested primer 2:GCGGTAGTAGGATGCATGCT