Insertion junction: CLIP2.040221_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040221
Chromosome:chromosome 10
Location:6441588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464800 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTAAGCCGCCATACACAACAGAACACCGTAGGAGCATAGCAGGGGAC
Internal bar code:GGCAAAGCAGAATGCTTTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2935
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTAGTAGGATGCATGCT
Suggested primer 2:CGTTCCTTCAGACACGTGGA