Insertion junction: CLIP2.040223_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040223
Chromosome:chromosome 2
Location:2857914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094750 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAATTCAAGGCCAGGTGTGTCCTAAATGCCGACGGTCGGGACGACGGTA
Internal bar code:TGCATATACTTAACCACGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:967
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCATCGTCGACTGCAA
Suggested primer 2:GAAGGAAACACCGCAAACCC