Insertion junction: CLIP2.040238_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040238
Chromosome:chromosome 1
Location:8067651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g062902 (1 of 1) K15148 - mediator of RNA polymerase II transcription subunit 7 (MED7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCGGCATCCGCTGCAGAACTTGACTCAACATGCGCCGTGGTCGTGT
Internal bar code:ACTTTACGGGCCGCGGGACGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1971
LEAP-Seq percent confirming:98.4127
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCACCGAAGACTGCAGA
Suggested primer 2:TGCAGCTCACCAACATGCTA