Insertion junction: CLIP2.040238_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040238
Chromosome:chromosome 1
Location:8067660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g062902 (1 of 1) K15148 - mediator of RNA polymerase II transcription subunit 7 (MED7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGCCGTGCCATGAATCTCTGTTTGTAGGGTGCTTGTGTGCGCCCCC
Internal bar code:ACTTTACGGGCCGCGGGACGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:209
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGCTCACCAACATGCTA
Suggested primer 2:AATGCACCGAAGACTGCAGA