Insertion junction: CLIP2.040241_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040241
Chromosome:chromosome 13
Location:2557259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801533 (1 of 2) 2.4.1.11 - Glycogen(starch) synthase / UDP-glucose--glycogen glucosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGAGGACTGGCAAGGCGAGAAAAAAATAGATATAGAGATGGAGAAG
Internal bar code:AAGGAAGGCCGTCCGTTTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2567
LEAP-Seq percent confirming:98.3607
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGGACGCTTCAACAAAG
Suggested primer 2:ACTGCAAACCATTCACGCAC