Insertion junction: CLIP2.040241_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040241
Chromosome:chromosome 13
Location:2557269
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801533 (1 of 2) 2.4.1.11 - Glycogen(starch) synthase / UDP-glucose--glycogen glucosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCGCTTCTCATGAAAGCTTGTGTACGAAGACATGTGTGTGCAAGCTT
Internal bar code:TATGTTGTTGTGGTTCTTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3812
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:123
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCAAACCATTCACGCAC
Suggested primer 2:TTGCGGACGCTTCAACAAAG