Insertion junction: CLIP2.040247_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040247
Chromosome:chromosome 3
Location:341797
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144607 (1 of 79) IPR011992 - EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCCAGGCGCGAGCAGCGGCGTAACGCCTACCGCCTGGCGCGCAAGCT
Internal bar code:ATCGTAGCTTTTGATTGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:382
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGATCAGGTCCACCATCTGG
Suggested primer 2:GACTTGCCACACTGCAACTG