Insertion junction: CLIP2.040251_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040251
Chromosome:chromosome 13
Location:4943634
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605750 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGGAAAATAAGTTGATTTCTGATGTGTAATCCTCCCAGTAGCCGTAA
Internal bar code:GAGGGGGATTCAGGAACATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1439
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCCGCCATCATCTGTTT
Suggested primer 2:AGCAACGCTCGAAGTCTTCA