Insertion junction: CLIP2.040253_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040253
Chromosome:chromosome 3
Location:4003213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171650 HEL16 (1 of 2) PTHR18934:SF145 - ATP-DEPENDENT RNA HELICASE DHX57-RELATED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGGAGGGGGGTGGCAGCCCGTGAGGCTGGGGTCCACACGTTCAGTC
Internal bar code:TTTGTTGATCCCACTTTTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1476
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGTGCTACAGCCACAGG
Suggested primer 2:AGAGAGGGTGAAAGTGCGTG