Insertion junction: CLIP2.040253_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040253
Chromosome:chromosome 3
Location:4003217
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171650 HEL16 (1 of 2) PTHR18934:SF145 - ATP-DEPENDENT RNA HELICASE DHX57-RELATED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTCATGCATCCTCTACCGCTTTACCAACCATCTTTGCAACTCCCCGC
Internal bar code:TGGTGATAGAGGTTCTAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:382
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAGGGTGAAAGTGCGTG
Suggested primer 2:AATGGTGCTACAGCCACAGG