Insertion junction: CLIP2.040256_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040256
Chromosome:chromosome 7
Location:5617742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352300 (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCAAGGTTGGCAGCAATTCTGACCAAAGGGACCCCCATCAGAAGAG
Internal bar code:TGTTCTTCGAGGTGGTATTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1790
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGGCACCTCTACCAGCA
Suggested primer 2:CAAAACCTGGCCAGAGCAAC