Insertion junction: CLIP2.040259_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040259
Chromosome:chromosome 10
Location:4156173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448900 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGCCGTGCGGGCGCGCGGGGTCGCCACGGGCAGTGGGGGACGGGGTG
Internal bar code:GATTTCTGGTGTACCACTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2368
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:ACATAAGGCGGTGACTGGTG
Suggested primer 2:AATTTGCGATCGCGGGATTG