Insertion junction: CLIP2.040265_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040265
Chromosome:chromosome 3
Location:1924265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155051 SPA1 Sphinganine-1-phosphate aldolase/lyase; (1 of 1) 4.1.2.27 - Sphinganine-1-phosphate aldolase / Sphingosine-1-phosphate lyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGTTTGAGTGGGGTGCGGGGCGCGCGCTGATGGGGGCAAGGCAGCGT
Internal bar code:GTACGGCTTTCTCTGTTTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1246
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTATCACTTGGCTTGGGC
Suggested primer 2:AAATGCACAAACCCGTTCCG