Insertion junction: CLIP2.040267_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040267
Chromosome:chromosome 3
Location:539200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145187 (1 of 274) IPR020683 - Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACATCGAGTGCAGGGCGCCAAGCCCATGGCACTGGACGCGATGCGCG
Internal bar code:TAGGTCTTTATTAAATTTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5253
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGCATGACCACACACC
Suggested primer 2:GACCCACAAGCCAATTGCAG