Insertion junction: CLIP2.040268_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040268
Chromosome:chromosome 2
Location:7642158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147700 (1 of 1) PTHR11271//PTHR11271:SF33 - CHLOROHYDROLASE FAMILY PROTEINS // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACAGGCCACGCGCTGAGTCAGACGGGCGGACACGGTGACTTCCGGGGG
Internal bar code:TTGTCTTCCCTTGTAGGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1290
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTACACGCAACCACACACAC
Suggested primer 2:CTTGCATATGCCGTCAAGCC