Insertion junction: CLIP2.040272_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040272
Chromosome:chromosome 17
Location:1578757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707250 MFT29 Major facilitator superfamily transporter; (1 of 82) IPR020846 - Major facilitator superfamily domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGCGGTTCCGGGCATTGACGCGGCGGCGGAGGCGGCCATTGCGGC
Internal bar code:AATAGCAGGCCCTATGCCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:904
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AATCTCCTCCTCCTCCACCC
Suggested primer 2:GTGAGTCAACCGAGGGGAAG