Insertion junction: CLIP2.040281_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040281
Chromosome:chromosome 10
Location:2517638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436000 POC2 Proteome of centriole protein 2; (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTATCCACATGGCGCTCCATTATACAATTTGCAGCTGGCAGCAGCGC
Internal bar code:TGTATGTTAAGGCTACAACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1591
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGCATCCAGAGCGTAGG
Suggested primer 2:CCAATCTCTGCCATTTCGCG