Insertion junction: CLIP2.040292_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040292
Chromosome:chromosome 7
Location:4532924
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343900 (1 of 2) IPR011038 - Calycin-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATACCTGCTGCGGTGAGCCGCCGGTCTTACCAACCGGAAATGTGTGTG
Internal bar code:CGAATTTTGTTCTTTATGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1055
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGATCCTGTTGGTCGT
Suggested primer 2:CGGAACAGGTCGCTAGCTAG