Insertion junction: CLIP2.040292_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040292
Chromosome:chromosome 7
Location:4532929
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343900 (1 of 2) IPR011038 - Calycin-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTCAGGTAACATCCGTAAACCGTCGCTTTGCTGCATCGCATACACTG
Internal bar code:CGAATTTTGTTCTTTATGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:94.6429
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAACAGGTCGCTAGCTAG
Suggested primer 2:CTGCTGATCCTGTTGGTCGT