Insertion junction: CLIP2.040293_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.040293
Chromosome:chromosome 17
Location:383233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698550 (1 of 6) IPR000104//IPR000719//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGATTGCATAAAAGCAACTTGGCCTCGCCGCACTCCAGACTCGGAGAC
Internal bar code:GGGGGGCGGTGGGGGGTTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1287
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGATAGCTTGAAGGGCGGAT
Suggested primer 2:TGATGTGCGTGTTGACCGTA