Insertion junction: CLIP2.040293_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.040293
Chromosome:chromosome 17
Location:383244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698550 (1 of 6) IPR000104//IPR000719//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAATCTCAAGCAAGTCATATGCATGTAAACCATCTTGCTTGATTGCT
Internal bar code:GGGGGGCGGTGGGGGGTTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTGCGTGTTGACCGTA
Suggested primer 2:CGATAGCTTGAAGGGCGGAT