Insertion junction: CLIP2.040296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040296
Chromosome:chromosome 13
Location:2666914
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581350 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGCAAGGCACACAACAACACCGGACCCACCTCCAGCGCCGCCGTTGGC
Internal bar code:AGATACAATGTTCTCTAACAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2574
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACATATGCACGCCGTGATG
Suggested primer 2:GACCTTATAGACGCGCTGCT