Insertion junction: CLIP2.040297_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040297
Chromosome:chromosome 12
Location:5028428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525350 PTK15 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCTGTGCTGGCGGCGCCCGCGGCGGCCAAGGAGCTCGTGATCGCCA
Internal bar code:GGTTCAAACCTAAGCCTTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:673
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATGCGTCTCCTACTAT
Suggested primer 2:TCCCATTGCAGCAAGAGGAG