Insertion junction: CLIP2.040297_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040297
Chromosome:chromosome 12
Location:5028429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g525350 PTK15 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGACCGGGCCCTGTGACACAATCGCCTCGACCACGCAGGCGGGCCCGC
Internal bar code:GGTTCAAACCTAAGCCTTACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3226
LEAP-Seq percent confirming:70.3704
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCATTGCAGCAAGAGGAG
Suggested primer 2:GCGCATGCGTCTCCTACTAT