Insertion junction: CLIP2.040303_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.040303
Chromosome:chromosome 3
Location:3309252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165750 (1 of 1) K03018 - DNA-directed RNA polymerase III subunit RPC1 (RPC1, POLR3A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCGAGTGGCGAGGGGCGTGGTGTCAGTGAAGGGGGCGGCAGCTGC
Internal bar code:GCAATGTGGTATGTAAGTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1381
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAATAGTCGGGCGGTGTAGG
Suggested primer 2:GTGTGTGGTGTGTGGGTGTA