Insertion junction: CLIP2.040305_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.040305
Chromosome:chromosome 3
Location:4883689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178500 RIB43,RIB43a (1 of 1) PTHR14517//PTHR14517:SF6 - RIB43A-RELATED // SUBFAMILY NOT NAMED; Flagellar protofilament ribbon protein 43 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTAGTGCTAAACCCCAGACAGCCTCACCCCAACCAGCATGCCCTTGG
Internal bar code:TTCCGAGCTTGCTAAGTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2801
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCACGCAAGCACAACTT
Suggested primer 2:AAACTTCTGCAGGGAGGACG