Insertion junction: CLIP2.040315_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.040315
Chromosome:chromosome 10
Location:4197384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449200 ANK5 (1 of 1) PTHR22849//PTHR24133//PTHR24133:SF23 - WDSAM1 PROTEIN // FAMILY NOT NAMED // SUBFAMILY NOT NAMED; Predicted protein with ankyrin repeats CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTGAGCCTGGCCGCGGCCAGGAACGGCCAGCTTCCGCTGCACTGGGC
Internal bar code:GTTCAGGTGCCGTTAGTGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:895
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAACCATTGCGGGTCACG
Suggested primer 2:TGGGGGTATGTGCATGTCAC