Insertion junction: CLIP2.040316_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.040316
Chromosome:chromosome 9
Location:4557835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401256 (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGGGGGAGAGCAAGAGGGGGCGAGCGTGTCTGTGCGGGATGCAAGTG
Internal bar code:CATAGGTGACCGATCACGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:42.1053
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGACTTCTCCGGAGCGAA
Suggested primer 2:TCGCTCGCCTGAATGAAAGT