Insertion junction: CLIP2.040323_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.040323
Chromosome:chromosome 3
Location:4450354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175550 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGACAGCCCCAGCGCCGCCGCCGCCACCTCCGCCAGCTCCACACCGTA
Internal bar code:GTAGATCTAAAGTGGTGATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1734
LEAP-Seq percent confirming:20.8333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGTAGTATCACAACGCGG
Suggested primer 2:CTCCTACTCTTGGCGCTGAC