Insertion junction: CLIP2.040329_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.040329
Chromosome:chromosome 2
Location:566613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076987 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGGTTTAGCATCGCTCACCCGTCCGATCCACCAAACCAAGTGGCTCG
Internal bar code:GACTATCATATCTTTTCTGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2531
LEAP-Seq percent confirming:99.1803
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:122

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACGGAACTGTCGACACA
Suggested primer 2:AGGCCACAGCTATCCTGGTA